Run Statistics ⓘ
| Measure | Value |
|---|---|
| Report name | Formation_MinION |
| Experiment group | TOTO |
| Sample ID | no_sample |
| Run ID | ec55bcd2efa6d77e9b07d97d4dbbdf4ea224aadb |
| Run date | Mon Mar 15 15:09:12 UTC 2021 |
| Run duration | 0h39m01s |
| Flowcell ID | FAO31058 |
| Flowcell product code | FLO-MIN106 |
| Flowcell version | Unknown |
| Kit | Unknown |
| Yield | 33.60M |
| Read count | 21,360 |
| N50 (bp) | 2,213 |
| L50 | 16,792 |
Device and software information ⓘ
| Measure | Value |
|---|---|
| Device type | minion_mk1c |
| Device ID | MC-110337_0 |
| Device hostname | MC-110337 |
| Device OS | ubuntu 16.04 |
| Distribution version | 21.02.2 |
| MinKNOW version | 4.2.4 |
| Basecaller name | guppy-basecalling |
| Basecaller version | 4.3.4+ecb2805 |
| Basecaller analysis | 1d_basecalling |
| Basecalling date | Sun Mar 21 16:17:39 UTC 2021 |
| Model file | template_r9.4.1_450bps_fast.jsn |
| Min qscore threshold | 7.00 |
| ToulligQC version | 2.0.1 |
| All reads | Pass reads | Fail reads | Pass barcoded reads | Fail barcoded reads | |
|---|---|---|---|---|---|
| count | 21,360 | 14,382 | 6,978 | 13,980 | 4,495 |
| percent | 100.00 | 67.33 | 32.67 | 65.45 | 21.04 |
| All reads | Pass reads | Fail reads | |
|---|---|---|---|
| count | 21,360 | 14,382 | 6,978 |
| mean | 1,573.09 | 1,644.88 | 1,425.12 |
| std | 1,326.46 | 1,333.45 | 1,299.58 |
| min | 20.00 | 147.00 | 20.00 |
| 25% | 655.00 | 696.25 | 579.00 |
| median | 1,126.50 | 1,211.00 | 981.00 |
| 75% | 2,018.00 | 2,093.75 | 1,819.00 |
| max | 22,666.00 | 9,276.00 | 22,666.00 |
| All reads | Pass reads | Fail reads | |
|---|---|---|---|
| count | 21,360 | 14,382 | 6,978 |
| mean | 7.66 | 8.65 | 5.60 |
| std | 1.75 | 1.01 | 1.00 |
| min | 2.90 | 7.00 | 2.90 |
| 25% | 6.51 | 7.85 | 4.80 |
| median | 7.87 | 8.58 | 5.78 |
| 75% | 8.95 | 9.35 | 6.47 |
| max | 13.14 | 13.14 | 6.00 |
Channel occupancy of the flowcell ⓘ
| Barcode arrangement (%) | Read count | |
|---|---|---|
| barcode11 | 67.78% | 9,748 |
| barcode12 | 29.43% | 4,232 |
| other barcodes | 0.13% | 19 |
| unclassified | 2.66% | 383 |
| Barcode arrangement (%) | Read count | |
|---|---|---|
| barcode11 | 43.49% | 3,035 |
| barcode12 | 20.92% | 1,460 |
| other barcodes | 2.59% | 181 |
| unclassified | 32.99% | 2,302 |